| Method : | Boris Reva, Yevgeniy Antipin, Chris Sander |
| Implementation : | Yevgeniy Antipin |
| Maintenance, rel.3: | Robert Sheridan |
| Advice and support : | Alex Lash, Caitlin Byrne, Aaron Gabow, Joanne Edington, Nikolaus Schultz |
Genomic mapping provided by CBio Mapback
| |  (Reaches all authors) |
| MSA building queue : | 0 |
| Variant analysis queue : | 0 |
| number of built Uniprot-based msa1) in the database : | 146,390 | | average width of msa in the database : | 102.4 | | average height of msa in the database : | 324.2 | | | number of human Uniprot proteins (SwissProt+Trembl) : | 205,064 | | total length of human Uniprot proteins : | 44,836,999 | | total length of human Uniprot proteins covered with msa : | 13,236,898 | | fraction of total length of human Uniprot proteins covered with msa : | 29.52% | | | number of human Refseq proteins : | 71,867 | | total length of human Refseq proteins : | 46,120,599 | | number of human Refseq proteins mapped to Uniprot : | 64,712 | | fraction of total length of human Refseq proteins covered with Uniprot-based msa : | 24.14% | | number of human Refseq proteins covered with at least one Uniprot-based msa : | 20,249 | | | number of PDB structures with at least one protein chain: | 100,083 | | total length of unique PDB protein chains2) : | 45,672,006 | | fraction of total length that is in a binding site with another protein chain : | 12.89% | | fraction of total length that is in a binding site with small molecule : | 3.69% | | fraction of total length that is in a binding site with DNA/RNA : | 2.15% |
1) msa = multiple sequence alignment
2) only residues with all ATOM records intact are included in chain sequence; chain is considered unique if it
differs from any other chain in the same PDB file by one or more residues
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